Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS03295 | Not Available | Positive | 753754 - 754374 | 23497.3 |
| hypothetical protein | Lupro_RS03300 | Not Available | Positive | 754386 - 754841 | 17698.9 |
| abc-f family atp-binding cassette domain-containing protein | Lupro_RS03305 | Not Available | Negative | 754868 - 756493 | 61587.3 |
| hypothetical protein | Lupro_RS03310 | Not Available | Positive | 756660 - 758045 | 54082.9 |
| dead/deah box helicase | Lupro_RS03315 | Not Available | Positive | 758141 - 759916 | 66758.8 |
| ornithine--oxo-acid transaminase | Lupro_RS03320 | Not Available | Negative | 760012 - 761253 | 45558.6 |
| c-type cytochrome | Lupro_RS03325 | Not Available | Positive | 761495 - 761953 | 16691.3 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | Lupro_RS03330 | Not Available | Positive | 762031 - 763440 | 53832.9 |
| duf6452 family protein | Lupro_RS03335 | Not Available | Positive | 763448 - 763900 | 17603.0 |
| duf6048 family protein | Lupro_RS03340 | Not Available | Positive | 763866 - 764558 | 26719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
