Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | Lupro_RS03240 | Not Available | Positive | 743823 - 744014 | 7031.28 |
| d-alanyl-d-alanine carboxypeptidase | Lupro_RS03245 | Not Available | Positive | 744123 - 745391 | 48794.7 |
| atp-grasp domain-containing protein | Lupro_RS03250 | Not Available | Positive | 745623 - 746795 | 45374.8 |
| aspartate/glutamate racemase family protein | Lupro_RS03255 | Not Available | Positive | 746811 - 747509 | 26233.3 |
| mbl fold metallo-hydrolase | Lupro_RS03260 | Not Available | Negative | 747511 - 748275 | 29125.4 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | Lupro_RS03270 | Not Available | Positive | 748732 - 749832 | 39755.0 |
| nad(p) transhydrogenase subunit alpha | Lupro_RS03275 | Not Available | Positive | 749845 - 750153 | 11012.2 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | Lupro_RS03280 | Not Available | Positive | 750153 - 751538 | 48611.6 |
| nicotinate-nucleotide adenylyltransferase | Lupro_RS03285 | Not Available | Positive | 751664 - 753118 | 55922.8 |
| rna polymerase sigma factor | Lupro_RS03290 | Not Available | Positive | 753177 - 753719 | 21340.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
