Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | Lupro_RS03150 | Not Available | Positive | 718426 - 719520 | 41394.9 |
| cdp-alcohol phosphatidyltransferase family protein | Lupro_RS03155 | Not Available | Positive | 719536 - 720174 | 23783.0 |
| catalase/peroxidase hpi | Lupro_RS03160 | Not Available | Negative | 720481 - 722661 | 81749.4 |
| lysr substrate-binding domain-containing protein | Lupro_RS03165 | Not Available | Positive | 722845 - 723768 | 35208.2 |
| t9ss type a sorting domain-containing protein | Lupro_RS03170 | Not Available | Negative | 723868 - 725376 | 57187.5 |
| hypothetical protein | Lupro_RS03175 | Not Available | Negative | 725427 - 725699 | 9936.57 |
| endonuclease/exonuclease/phosphatase family protein | Lupro_RS03180 | Not Available | Negative | 725912 - 726667 | 29226.9 |
| hypothetical protein | Lupro_RS13825 | Not Available | Negative | 726993 - 727115 | 4425.46 |
| asparagine synthase b | Lupro_RS13655 | Not Available | Positive | 727185 - 727298 | 4613.42 |
| crp/fnr family transcriptional regulator | Lupro_RS03185 | Not Available | Positive | 727565 - 728128 | 21898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
