Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | Lupro_RS03050 | Not Available | Positive | 693466 - 693783 | 12776.6 |
| is30 family transposase | Lupro_RS03055 | Not Available | Positive | 693992 - 695005 | 39589.9 |
| hypothetical protein | Lupro_RS03060 | Not Available | Positive | 695232 - 696182 | 37909.1 |
| integrase core domain-containing protein | Lupro_RS03065 | Not Available | Positive | 696424 - 697605 | 46115.8 |
| fic family protein | Lupro_RS03070 | Not Available | Positive | 697781 - 698854 | 41311.2 |
| hypothetical protein | Lupro_RS03075 | Not Available | Positive | 699017 - 699523 | 19495.6 |
| duf4932 domain-containing protein | Lupro_RS03080 | Not Available | Positive | 699751 - 700794 | 40621.9 |
| is30 family transposase | Lupro_RS03085 | Not Available | Positive | 701002 - 702015 | 39589.9 |
| integrase core domain-containing protein | Lupro_RS03090 | Not Available | Positive | 702246 - 703427 | 46115.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | Lupro_RS03095 | Not Available | Positive | 703925 - 706237 | 88609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
