Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | Lupro_RS02950 | Not Available | Positive | 672054 - 672956 | 35345.2 |
| hypothetical protein | Lupro_RS02955 | Not Available | Positive | 673262 - 674875 | 59475.1 |
| hypothetical protein | Lupro_RS02960 | Not Available | Positive | 674877 - 675305 | 16792.9 |
| integrase core domain-containing protein | Lupro_RS02965 | Not Available | Positive | 675539 - 676720 | 46115.8 |
| hypothetical protein | Lupro_RS02970 | Not Available | Positive | 677359 - 677577 | 8607.54 |
| type ii toxin-antitoxin system rele/pare family toxin | Lupro_RS02975 | Not Available | Positive | 677577 - 677882 | 11946.4 |
| hypothetical protein | Lupro_RS02980 | Not Available | Positive | 678086 - 678478 | 15628.3 |
| nerd domain-containing protein/dead/deah box helicase | Lupro_RS02985 | Not Available | Positive | 678742 - 681600 | 109708.0 |
| tetratricopeptide repeat protein | Lupro_RS02990 | Not Available | Positive | 681600 - 683027 | 56209.0 |
| integrase core domain-containing protein | Lupro_RS02995 | Not Available | Positive | 683371 - 684552 | 46113.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
