Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | Lupro_RS00250 | Not Available | Negative | 52838 - 53608 | 29460.3 |
| acetyl-coa c-acyltransferase | Lupro_RS00255 | Not Available | Negative | 53616 - 54791 | 41060.5 |
| fad-dependent oxidoreductase | Lupro_RS00260 | Not Available | Positive | 54940 - 56337 | 53379.7 |
| hd family phosphohydrolase | Lupro_RS00265 | Not Available | Positive | 56377 - 58431 | 78738.0 |
| Trna-ser | Not Available | Not Available | Positive | 58533 - 58616 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 58630 - 58704 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 58720 - 58793 | Not Available |
| pd40 domain-containing protein | Lupro_RS00285 | Not Available | Positive | 59438 - 60442 | 37982.9 |
| helix-turn-helix domain-containing protein | Lupro_RS00290 | Not Available | Positive | 60780 - 61127 | 13133.8 |
| type ii toxin-antitoxin system hipa family toxin | Lupro_RS00295 | Not Available | Positive | 61127 - 62431 | 49346.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
