Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tpm domain-containing protein | Lupro_RS02700 | Not Available | Positive | 618143 - 618682 | 20170.6 |
| is30 family transposase | Lupro_RS02705 | Not Available | Positive | 618888 - 619901 | 39589.9 |
| hypothetical protein | Lupro_RS02710 | Not Available | Positive | 620113 - 620331 | 8607.54 |
| type ii toxin-antitoxin system rele/pare family toxin | Lupro_RS02715 | Not Available | Positive | 620331 - 620636 | 11946.4 |
| nuclease-related domain-containing dead/deah box helicase | Lupro_RS02720 | Not Available | Positive | 620805 - 622955 | 85041.1 |
| hypothetical protein | Lupro_RS02725 | Not Available | Positive | 623648 - 625759 | 82296.2 |
| integrase core domain-containing protein | Lupro_RS02730 | Not Available | Positive | 625933 - 627114 | 46127.8 |
| duf2007 domain-containing protein | Lupro_RS02735 | Not Available | Positive | 627801 - 628214 | 15521.9 |
| simpl domain-containing protein | Lupro_RS02740 | Not Available | Positive | 629014 - 629718 | 26701.9 |
| ribbon-helix-helix domain-containing protein | Lupro_RS02745 | Not Available | Positive | 629917 - 630156 | 9146.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
