Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| letm1 domain-containing protein | Lupro_RS02660 | Not Available | Positive | 606836 - 607228 | 14915.6 |
| hu family dna-binding protein | Lupro_RS02665 | Not Available | Negative | 607233 - 607634 | 15152.8 |
| tyrosine-type recombinase/integrase | Lupro_RS02670 | Not Available | Positive | 608003 - 609196 | 46723.2 |
| hypothetical protein | Lupro_RS02675 | Not Available | Positive | 609250 - 610236 | 38625.3 |
| restriction endonuclease subunit s | Lupro_RS02680 | Not Available | Positive | 610498 - 614256 | 144051.0 |
| duf262 domain-containing protein | Lupro_RS13650 | Not Available | Positive | 614529 - 614993 | 18546.0 |
| gmrsd restriction endonuclease domain-containing protein | Lupro_RS02685 | Not Available | Positive | 614990 - 616297 | 50904.3 |
| hypothetical protein | Lupro_RS13510 | Not Available | Positive | 616517 - 616654 | 4974.21 |
| hypothetical protein | Lupro_RS02690 | Not Available | Positive | 616632 - 617072 | 16666.5 |
| duf5655 domain-containing protein | Lupro_RS02695 | Not Available | Positive | 617082 - 617993 | 35530.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
