Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | Lupro_RS02615 | Not Available | Negative | 590458 - 593673 | 118795.0 |
| hypothetical protein | Lupro_RS13505 | Not Available | Positive | 594339 - 594512 | 6541.03 |
| molybdopterin-dependent oxidoreductase | Lupro_RS02620 | Not Available | Positive | 594512 - 596629 | 78788.6 |
| tetratricopeptide repeat protein | Lupro_RS02625 | Not Available | Negative | 596663 - 597292 | 23999.9 |
| hypothetical protein | Lupro_RS02630 | Not Available | Negative | 597280 - 598605 | 49860.3 |
| urea transporter | Lupro_RS02635 | Not Available | Negative | 598584 - 600791 | 82850.2 |
| diaminopimelate decarboxylase | Lupro_RS02640 | Not Available | Negative | 600910 - 602256 | 51013.3 |
| atp-grasp domain-containing protein | Lupro_RS02645 | Not Available | Negative | 602268 - 603311 | 39412.1 |
| pqqd family protein | Lupro_RS02650 | Not Available | Negative | 603314 - 603553 | 8895.49 |
| peptide mfs transporter | Lupro_RS02655 | Not Available | Positive | 604103 - 605455 | 49293.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
