Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reverse transcriptase family protein | Lupro_RS02565 | Not Available | Positive | 579464 - 580516 | 40740.3 |
| crispr-associated endonuclease cas1 | Lupro_RS02570 | Not Available | Positive | 580519 - 581511 | 38112.6 |
| crispr-associated endonuclease cas2 | Lupro_RS02575 | Not Available | Positive | 581492 - 581782 | 11311.0 |
| helix-turn-helix domain-containing protein | Lupro_RS02580 | Not Available | Positive | 582959 - 583531 | 21718.3 |
| hypothetical protein | Lupro_RS02585 | Not Available | Positive | 583648 - 584091 | 17486.0 |
| nad(p)/fad-dependent oxidoreductase | Lupro_RS02590 | Not Available | Negative | 584453 - 585694 | 45504.6 |
| phosphonatase-like hydrolase | Lupro_RS02595 | Not Available | Negative | 585728 - 586402 | 25162.5 |
| duf5690 family protein | Lupro_RS02600 | Not Available | Negative | 586455 - 587732 | 48864.5 |
| phosphoglyceromutase | Lupro_RS02605 | Not Available | Negative | 587802 - 588896 | 41822.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | Lupro_RS02610 | Not Available | Negative | 588996 - 590438 | 54280.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
