Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | Lupro_RS02465 | Not Available | Negative | 551432 - 552178 | 27292.9 |
| imidazole glycerol phosphate synthase subunit hish | Lupro_RS02470 | Not Available | Negative | 552283 - 552864 | 21411.2 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | Lupro_RS02475 | Not Available | Negative | 552932 - 554068 | 43087.5 |
| histidinol-phosphate transaminase | Lupro_RS02480 | Not Available | Negative | 554070 - 555119 | 39651.0 |
| histidinol dehydrogenase | Lupro_RS02485 | Not Available | Negative | 555234 - 556517 | 46581.1 |
| atp phosphoribosyltransferase | Lupro_RS02490 | Not Available | Negative | 556536 - 557393 | 31490.6 |
| phosphoribosylformylglycinamidine synthase | Lupro_RS02495 | Not Available | Positive | 557894 - 561670 | 139643.0 |
| amp-dependent synthetase/ligase | Lupro_RS02500 | Not Available | Positive | 561871 - 563652 | 67323.5 |
| dna polymerase iii subunit gamma/tau | Lupro_RS02505 | Not Available | Positive | 563698 - 565386 | 63829.2 |
| monovalent cation:proton antiporter family protein | Lupro_RS02510 | Not Available | Positive | 565437 - 567362 | 71855.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
