Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | Lupro_RS13625 | Not Available | Positive | 440479 - 440991 | 19436.0 |
| hsp20/alpha crystallin family protein | Lupro_RS01990 | Not Available | Positive | 441119 - 441562 | 17291.5 |
| hypothetical protein | Lupro_RS01995 | Not Available | Positive | 441633 - 442079 | 17616.9 |
| pseudouridine synthase | Lupro_RS02000 | Not Available | Negative | 442335 - 443036 | 27314.4 |
| phosphatase pap2 family protein | Lupro_RS02005 | Not Available | Positive | 443137 - 443712 | 21304.8 |
| hypothetical protein | Lupro_RS13495 | Not Available | Negative | 444716 - 445336 | 24172.9 |
| srpbcc domain-containing protein | Lupro_RS02015 | Not Available | Positive | 445308 - 445742 | 16875.5 |
| carbohydrate kinase family protein | Lupro_RS02020 | Not Available | Negative | 445781 - 446668 | 33344.6 |
| glycoside hydrolase family 13 protein | Lupro_RS02025 | Not Available | Negative | 446668 - 448515 | 71266.0 |
| lytr/algr family response regulator transcription factor | Lupro_RS02030 | Not Available | Positive | 448946 - 449572 | 24833.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
