Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | Lupro_RS01935 | Not Available | Positive | 430524 - 431033 | 19988.3 |
| hypothetical protein | Lupro_RS01940 | Not Available | Positive | 431020 - 431442 | 16441.7 |
| duf4252 domain-containing protein | Lupro_RS01945 | Not Available | Positive | 431451 - 431969 | 19485.7 |
| duf4252 domain-containing protein | Lupro_RS01950 | Not Available | Positive | 431971 - 432516 | 20391.9 |
| m1 family metallopeptidase | Lupro_RS01955 | Not Available | Positive | 432635 - 435070 | 94687.4 |
| helix-turn-helix domain-containing protein | Lupro_RS01960 | Not Available | Negative | 435328 - 435720 | 14883.0 |
| m14 family zinc carboxypeptidase | Lupro_RS01965 | Not Available | Positive | 436016 - 437119 | 42811.5 |
| lrp/asnc family transcriptional regulator | Lupro_RS01970 | Not Available | Positive | 437194 - 437673 | 18237.4 |
| alpha-ketoacid dehydrogenase subunit alpha/beta | Lupro_RS01975 | Not Available | Positive | 437775 - 439778 | 74786.2 |
| response regulator transcription factor | Lupro_RS01980 | Not Available | Positive | 439928 - 440461 | 20642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
