Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | Lupro_RS00155 | Not Available | Negative | 30964 - 31872 | 33980.8 |
| 5'-nucleotidase c-terminal domain-containing protein | Lupro_RS00160 | Not Available | Negative | 31880 - 32629 | 28811.1 |
| duf6913 domain-containing protein | Lupro_RS00165 | Not Available | Positive | 32681 - 33202 | 20300.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | Lupro_RS00170 | Not Available | Positive | 33202 - 34077 | 31592.5 |
| ferritin | Lupro_RS00175 | Not Available | Positive | 34135 - 34650 | 19460.2 |
| outer membrane protein assembly factor bamd | Lupro_RS00180 | Not Available | Positive | 34770 - 35597 | 32128.3 |
| dna-directed rna polymerase subunit omega | Lupro_RS00185 | Not Available | Positive | 35587 - 35913 | 12592.7 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | Lupro_RS00190 | Not Available | Positive | 35914 - 37128 | 44303.8 |
| asparagine synthase b | Lupro_RS00195 | Not Available | Positive | 37121 - 38007 | 33733.8 |
| aaa family atpase | Lupro_RS13885 | Not Available | Positive | 38030 - 38974 | 36031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
