Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | Lupro_RS01885 | Not Available | Negative | 416178 - 417260 | 39785.9 |
| aminopeptidase p n-terminal domain-containing protein | Lupro_RS01890 | Not Available | Positive | 417657 - 419120 | 55607.7 |
| threonine synthase | Lupro_RS01895 | Not Available | Negative | 419212 - 420507 | 48297.6 |
| homoserine kinase | Lupro_RS01900 | Not Available | Negative | 420721 - 421644 | 32992.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | Lupro_RS01905 | Not Available | Negative | 421650 - 424094 | 89823.4 |
| diaminopimelate decarboxylase | Lupro_RS01910 | Not Available | Negative | 424447 - 425655 | 45291.6 |
| peptidase t | Lupro_RS01915 | Not Available | Negative | 425798 - 427030 | 45975.9 |
| hypothetical protein | Lupro_RS01920 | Not Available | Negative | 427093 - 427650 | 21635.9 |
| wd40/yvtn/bnr-like repeat-containing protein | Lupro_RS01925 | Not Available | Negative | 427653 - 428696 | 38650.7 |
| s41 family peptidase | Lupro_RS01930 | Not Available | Negative | 428902 - 430380 | 55159.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
