Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | Lupro_RS01785 | Not Available | Negative | 398643 - 399233 | 23014.5 |
| rna-binding s4 domain-containing protein | Lupro_RS01790 | Not Available | Negative | 399226 - 399591 | 14431.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | Lupro_RS01795 | Not Available | Positive | 399671 - 400498 | 30434.8 |
| outer membrane beta-barrel protein | Lupro_RS01800 | Not Available | Negative | 400569 - 401189 | 22918.4 |
| transketolase family protein | Lupro_RS01805 | Not Available | Negative | 401241 - 402194 | 34250.4 |
| maf family nucleotide pyrophosphatase | Lupro_RS01810 | Not Available | Negative | 402247 - 402828 | 22421.2 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | Lupro_RS01815 | Not Available | Negative | 402832 - 403740 | 34607.4 |
| ssra-binding protein smpb | Lupro_RS01820 | Not Available | Negative | 403746 - 404204 | 17960.9 |
| ompw/alkl family protein | Lupro_RS01825 | Not Available | Positive | 404327 - 404968 | 23414.8 |
| sixa phosphatase family protein | Lupro_RS01830 | Not Available | Negative | 405024 - 405530 | 19593.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
