Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | Lupro_RS01635 | Not Available | Positive | 364444 - 365124 | 26523.8 |
| hypothetical protein | Lupro_RS01640 | Not Available | Negative | 365111 - 365479 | 14358.9 |
| alanine dehydrogenase | Lupro_RS01645 | Not Available | Negative | 365481 - 366683 | 43874.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | Lupro_RS01650 | Not Available | Negative | 366676 - 367092 | 16177.5 |
| bifunctional response regulator/alkaline phosphatase family protein | Lupro_RS01655 | Not Available | Negative | 367241 - 368791 | 59822.7 |
| hd domain-containing protein | Lupro_RS01660 | Not Available | Positive | 368839 - 370059 | 46906.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | Lupro_RS01665 | Not Available | Positive | 370094 - 371128 | 37194.6 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | Lupro_RS01670 | Not Available | Positive | 371128 - 372525 | 51883.5 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | Lupro_RS01675 | Not Available | Positive | 372525 - 373307 | 28196.3 |
| elongation factor p | Lupro_RS01680 | Not Available | Positive | 373360 - 373926 | 20932.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
