Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | Lupro_RS01580 | Not Available | Negative | 353526 - 354329 | 29237.4 |
| is4 family transposase | Lupro_RS01585 | Not Available | Positive | 354737 - 355933 | 46651.6 |
| translational gtpase typa | Lupro_RS01590 | Not Available | Positive | 356572 - 358341 | 66371.1 |
| duf2202 domain-containing protein | Lupro_RS01595 | Not Available | Positive | 358530 - 359135 | 22627.4 |
| c-type cytochrome | Lupro_RS01600 | Not Available | Positive | 359171 - 359662 | 18771.1 |
| nifb/nifx family molybdenum-iron cluster-binding protein | Lupro_RS01605 | Not Available | Negative | 359746 - 360141 | 14578.5 |
| marr family winged helix-turn-helix transcriptional regulator | Lupro_RS01610 | Not Available | Positive | 360593 - 361039 | 17148.8 |
| cap domain-containing protein | Lupro_RS01615 | Not Available | Positive | 361606 - 362103 | 18610.1 |
| acyl-coa thioesterase | Lupro_RS01625 | Not Available | Positive | 362690 - 363085 | 15503.1 |
| glycosyltransferase | Lupro_RS01630 | Not Available | Negative | 363112 - 364335 | 47135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
