Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | Lupro_RS01480 | Not Available | Positive | 326857 - 327915 | 38344.7 |
| hypothetical protein | Lupro_RS01485 | Not Available | Negative | 327971 - 328510 | 20686.4 |
| ompp1/fadl family transporter | Lupro_RS01490 | Not Available | Positive | 328695 - 330080 | 49380.9 |
| hypothetical protein | Lupro_RS01495 | Not Available | Positive | 330211 - 331428 | 46261.9 |
| atp-dependent helicase | Lupro_RS01500 | Not Available | Positive | 331507 - 333834 | 89277.2 |
| duf4290 domain-containing protein | Lupro_RS01505 | Not Available | Positive | 333898 - 334542 | 25435.5 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | Lupro_RS01510 | Not Available | Positive | 334566 - 335870 | 47373.0 |
| nucleotide exchange factor grpe | Lupro_RS01515 | Not Available | Positive | 335989 - 336507 | 19990.3 |
| molecular chaperone dnaj | Lupro_RS01520 | Not Available | Positive | 336519 - 337640 | 40865.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 337801 - 338100 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
