Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS01280 | Not Available | Negative | 280118 - 280972 | 31643.1 |
| bacillithiol biosynthesis deacetylase bshb1 | Lupro_RS01285 | Not Available | Positive | 281212 - 281928 | 26650.1 |
| Trna-his | Not Available | Not Available | Positive | 281982 - 282057 | Not Available |
| tetratricopeptide repeat protein | Lupro_RS01295 | Not Available | Positive | 282221 - 282904 | 25683.1 |
| excinuclease abc subunit uvra | Lupro_RS01300 | Not Available | Negative | 283144 - 285927 | 104488.0 |
| sigma-70 family rna polymerase sigma factor | Lupro_RS01305 | Not Available | Positive | 286183 - 286767 | 22826.8 |
| endonuclease iii domain-containing protein | Lupro_RS01310 | Not Available | Negative | 287004 - 287639 | 24231.8 |
| thioredoxin-dependent thiol peroxidase | Lupro_RS01315 | Not Available | Positive | 287675 - 288127 | 16969.4 |
| tonb-dependent receptor | Lupro_RS01320 | Not Available | Negative | 288598 - 291048 | 93175.6 |
| m23 family metallopeptidase | Lupro_RS01325 | Not Available | Negative | 291056 - 292768 | 65251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
