Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | Lupro_RS12995 | Not Available | Positive | 2950272 - 2951549 | 49123.3 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | Lupro_RS13000 | Not Available | Positive | 2951546 - 2952625 | 40517.4 |
| lipopolysaccharide biosynthesis protein | Lupro_RS13005 | Not Available | Positive | 2952625 - 2954085 | 55573.6 |
| hypothetical protein | Lupro_RS13010 | Not Available | Positive | 2954184 - 2954798 | 22445.9 |
| dinb family protein | Lupro_RS13015 | Not Available | Positive | 2954839 - 2955333 | 18451.0 |
| hypothetical protein | Lupro_RS13020 | Not Available | Negative | 2955326 - 2956378 | 40503.6 |
| duf6095 family protein | Lupro_RS13025 | Not Available | Negative | 2956381 - 2956605 | 8465.0 |
| nadp-dependent isocitrate dehydrogenase | Lupro_RS13030 | Not Available | Negative | 2956763 - 2958991 | 81839.9 |
| 50s ribosomal protein l19 | Lupro_RS13035 | Not Available | Negative | 2959763 - 2960116 | 13663.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | Lupro_RS13040 | Not Available | Negative | 2960205 - 2960882 | 25413.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
