Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:sodium symporter family protein | Lupro_RS12950 | Not Available | Negative | 2941419 - 2942324 | 33767.7 |
| duf4159 domain-containing protein | Lupro_RS12955 | Not Available | Negative | 2942333 - 2942947 | 23564.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | Lupro_RS12960 | Not Available | Negative | 2943009 - 2943716 | 27280.1 |
| gtp cyclohydrolase | Lupro_RS12965 | Not Available | Negative | 2943716 - 2944834 | 43761.5 |
| transporter | Lupro_RS12970 | Not Available | Negative | 2944840 - 2945784 | 36854.1 |
| duf4834 family protein | Lupro_RS12975 | Not Available | Positive | 2945883 - 2946143 | 9931.09 |
| hypothetical protein | Lupro_RS13920 | Not Available | Positive | 2946149 - 2946496 | 13657.8 |
| yfho family protein | Lupro_RS12980 | Not Available | Positive | 2946487 - 2948571 | 78634.2 |
| methyltransferase | Lupro_RS12985 | Not Available | Positive | 2948564 - 2949079 | 20314.4 |
| glycosyltransferase family 4 protein | Lupro_RS12990 | Not Available | Positive | 2949097 - 2950275 | 45199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
