Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS12900 | Not Available | Positive | 2930098 - 2930790 | 26959.5 |
| abc transporter atp-binding protein | Lupro_RS12905 | Not Available | Positive | 2930860 - 2931789 | 35041.4 |
| abc transporter permease | Lupro_RS12910 | Not Available | Positive | 2931782 - 2933092 | 48871.0 |
| mechanosensitive ion channel family protein | Lupro_RS12915 | Not Available | Positive | 2933096 - 2933926 | 31526.1 |
| sigma-54-dependent transcriptional regulator | Lupro_RS12920 | Not Available | Positive | 2933928 - 2935091 | 43295.8 |
| ppk2 family polyphosphate kinase | Lupro_RS12925 | Not Available | Positive | 2935100 - 2935948 | 33393.2 |
| 3'-5' exonuclease | Lupro_RS12930 | Not Available | Positive | 2936034 - 2936852 | 31463.6 |
| abc transporter atpase | Lupro_RS12935 | Not Available | Positive | 2936857 - 2937342 | 18917.5 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | Lupro_RS12940 | Not Available | Positive | 2937457 - 2940375 | 110517.0 |
| lysophospholipid acyltransferase family protein | Lupro_RS12945 | Not Available | Negative | 2940365 - 2941378 | 38866.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
