Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent enzyme | Lupro_RS12465 | Not Available | Negative | 2832349 - 2833965 | 58741.9 |
| copd family protein | Lupro_RS12470 | Not Available | Negative | 2834202 - 2834753 | 21794.5 |
| mfs transporter | Lupro_RS12475 | Not Available | Positive | 2834916 - 2836103 | 44106.9 |
| ferrochelatase | Lupro_RS12480 | Not Available | Negative | 2836100 - 2837119 | 38746.0 |
| helix-turn-helix transcriptional regulator | Lupro_RS12485 | Not Available | Negative | 2837126 - 2838019 | 34335.7 |
| glutamyl-trna reductase | Lupro_RS12490 | Not Available | Positive | 2838296 - 2839561 | 47816.7 |
| hydroxymethylbilane synthase | Lupro_RS12495 | Not Available | Positive | 2839548 - 2841128 | 59249.0 |
| porphobilinogen synthase | Lupro_RS12500 | Not Available | Positive | 2841193 - 2842155 | 35881.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | Lupro_RS12505 | Not Available | Positive | 2842260 - 2843558 | 46989.4 |
| uroporphyrinogen decarboxylase | Lupro_RS12510 | Not Available | Positive | 2843560 - 2844591 | 38840.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
