Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 2750124 - 2750197 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2750322 - 2750395 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2750586 - 2753468 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2753547 - 2753657 | Not Available |
| duf6526 family protein | Lupro_RS12135 | Not Available | Positive | 2753768 - 2754196 | 16494.3 |
| acyl-coa dehydrogenase | Lupro_RS12140 | Not Available | Negative | 2754319 - 2755461 | 41791.2 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | Lupro_RS12145 | Not Available | Negative | 2755580 - 2756911 | 50281.9 |
| sodium:proton antiporter nhad | Lupro_RS12150 | Not Available | Positive | 2757118 - 2758509 | 50887.0 |
| mota/tolq/exbb proton channel family protein | Lupro_RS12155 | Not Available | Positive | 2758587 - 2759288 | 25333.3 |
| exbd/tolr family protein | Lupro_RS12160 | Not Available | Positive | 2759385 - 2759777 | 14794.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
