Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS11965 | Not Available | Negative | 2715518 - 2716075 | 21604.7 |
| helix-turn-helix domain-containing protein | Lupro_RS11970 | Not Available | Negative | 2716473 - 2716751 | 10584.0 |
| rtec domain-containing protein | Lupro_RS11975 | Not Available | Negative | 2716914 - 2717759 | 33265.4 |
| site-specific integrase | Lupro_RS11980 | Not Available | Negative | 2717830 - 2719101 | 49571.2 |
| Trna-arg | Not Available | Not Available | Positive | 2719331 - 2719407 | Not Available |
| ssra-binding protein | Lupro_RS11990 | Not Available | Negative | 2719443 - 2719592 | 5804.4 |
| m56 family metallopeptidase | Lupro_RS11995 | Not Available | Negative | 2720084 - 2721778 | 64943.9 |
| blai/meci/copy family transcriptional regulator | Lupro_RS12000 | Not Available | Negative | 2721781 - 2722140 | 14232.0 |
| calcium/sodium antiporter | Lupro_RS12005 | Not Available | Positive | 2722379 - 2723314 | 33809.9 |
| glutamine synthetase iii | Lupro_RS12010 | Not Available | Positive | 2723496 - 2725682 | 81358.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
