Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase b | Lupro_RS13765 | Not Available | Positive | 2666504 - 2666741 | 8715.43 |
| s8 family peptidase | Lupro_RS11725 | Not Available | Positive | 2666950 - 2668191 | 42393.7 |
| lrp/asnc family transcriptional regulator | Lupro_RS11730 | Not Available | Negative | 2668275 - 2668724 | 17421.3 |
| hypothetical protein | Lupro_RS11735 | Not Available | Positive | 2668844 - 2669242 | 15659.2 |
| methylmalonyl-coa mutase family protein | Lupro_RS11740 | Not Available | Negative | 2669248 - 2672700 | 129345.0 |
| urocanate hydratase | Lupro_RS11745 | Not Available | Positive | 2673107 - 2675107 | 74860.4 |
| duf4136 domain-containing protein | Lupro_RS11750 | Not Available | Positive | 2675127 - 2675657 | 20113.3 |
| duf5522 domain-containing protein | Lupro_RS13560 | Not Available | Positive | 2675724 - 2675894 | 6782.02 |
| abc transporter substrate-binding protein | Lupro_RS11755 | Not Available | Negative | 2676004 - 2676810 | 31138.6 |
| orotidine-5'-phosphate decarboxylase | Lupro_RS11760 | Not Available | Negative | 2676797 - 2677618 | 30309.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
