Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | Lupro_RS11525 | Not Available | Negative | 2614491 - 2617481 | 109315.0 |
| formate--tetrahydrofolate ligase | Lupro_RS11530 | Not Available | Positive | 2617650 - 2619326 | 60851.1 |
| malate dehydrogenase | Lupro_RS11535 | Not Available | Negative | 2619393 - 2620316 | 32267.4 |
| duf6588 family protein | Lupro_RS11540 | Not Available | Negative | 2620447 - 2621460 | 36840.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | Lupro_RS11545 | Not Available | Negative | 2621563 - 2623503 | 72057.0 |
| m16 family metallopeptidase | Lupro_RS11550 | Not Available | Positive | 2623823 - 2626666 | 108641.0 |
| glutamine-hydrolyzing gmp synthase | Lupro_RS11555 | Not Available | Positive | 2626798 - 2628330 | 56706.2 |
| lysm peptidoglycan-binding domain-containing protein | Lupro_RS11560 | Not Available | Positive | 2628353 - 2630047 | 64918.3 |
| hypothetical protein | Lupro_RS11565 | Not Available | Negative | 2630110 - 2630625 | 19527.7 |
| cytochrome c biogenesis protein ccsa | Lupro_RS11570 | Not Available | Negative | 2630679 - 2633798 | 118672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
