Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | Lupro_RS11475 | Not Available | Negative | 2602669 - 2603970 | 50471.6 |
| duf5916 domain-containing protein | Lupro_RS11480 | Not Available | Negative | 2604149 - 2606347 | 85213.9 |
| lysine--trna ligase | Lupro_RS11485 | Not Available | Negative | 2606697 - 2608397 | 64305.3 |
| duf456 domain-containing protein | Lupro_RS11490 | Not Available | Negative | 2608642 - 2609151 | 18516.5 |
| blai/meci/copy family transcriptional regulator | Lupro_RS11495 | Not Available | Positive | 2609284 - 2609655 | 14229.1 |
| m56 family metallopeptidase | Lupro_RS11500 | Not Available | Positive | 2609652 - 2611157 | 58185.8 |
| hypothetical protein | Lupro_RS11505 | Not Available | Positive | 2611369 - 2611680 | 12367.0 |
| hypothetical protein | Lupro_RS11510 | Not Available | Positive | 2611720 - 2612193 | 18011.4 |
| gtpase obge | Lupro_RS11515 | Not Available | Negative | 2612196 - 2613188 | 36296.4 |
| adenylate kinase | Lupro_RS13325 | Not Available | Negative | 2613243 - 2614358 | 42184.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
