Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | Lupro_RS11275 | Not Available | Negative | 2553785 - 2555641 | 70211.7 |
| rod shape-determining protein mred | Lupro_RS11280 | Not Available | Negative | 2555642 - 2556148 | 19258.2 |
| rod shape-determining protein mrec | Lupro_RS11285 | Not Available | Negative | 2556141 - 2556974 | 31926.4 |
| rod shape-determining protein | Lupro_RS11290 | Not Available | Negative | 2556997 - 2558025 | 37421.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | Lupro_RS11295 | Not Available | Negative | 2558078 - 2559604 | 56440.7 |
| gaf domain-containing protein | Lupro_RS11300 | Not Available | Negative | 2559924 - 2560376 | 16894.3 |
| exosortase family protein xrtf | Lupro_RS11305 | Not Available | Positive | 2560416 - 2560952 | 20590.8 |
| exosortase f system-associated membrane protein | Lupro_RS11310 | Not Available | Positive | 2560949 - 2561371 | 17263.9 |
| heavy metal-binding domain-containing protein | Lupro_RS11315 | Not Available | Positive | 2561416 - 2561706 | 10934.4 |
| carboxypeptidase regulatory-like domain-containing protein | Lupro_RS11320 | Not Available | Negative | 2561748 - 2564192 | 93396.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
