Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | Lupro_RS11225 | Not Available | Positive | 2544739 - 2545461 | 26707.7 |
| porin family protein | Lupro_RS11230 | Not Available | Negative | 2545466 - 2546161 | 26672.0 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | Lupro_RS11235 | Not Available | Negative | 2546165 - 2546893 | 27028.8 |
| nifu family protein | Lupro_RS11240 | Not Available | Negative | 2546899 - 2547795 | 33415.4 |
| ompp1/fadl family transporter | Lupro_RS11245 | Not Available | Negative | 2547903 - 2549237 | 49992.2 |
| hypothetical protein | Lupro_RS13875 | Not Available | Negative | 2549251 - 2550423 | 45559.4 |
| proline--trna ligase | Lupro_RS11255 | Not Available | Positive | 2550529 - 2552004 | 56131.1 |
| Trna-glu | Not Available | Not Available | Positive | 2552092 - 2552163 | Not Available |
| 30s ribosomal protein s20 | Lupro_RS11265 | Not Available | Positive | 2552187 - 2552438 | 9562.84 |
| rod shape-determining protein roda | Lupro_RS11270 | Not Available | Negative | 2552524 - 2553795 | 48550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
