Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | Lupro_RS10625 | Not Available | Negative | 2402600 - 2405863 | 119180.0 |
| fecr family protein | Lupro_RS10630 | Not Available | Negative | 2406048 - 2407205 | 44224.1 |
| rna polymerase sigma factor | Lupro_RS10635 | Not Available | Positive | 2407305 - 2407904 | 23666.6 |
| s41 family peptidase | Lupro_RS10640 | Not Available | Negative | 2408255 - 2411467 | 121754.0 |
| yifb family mg chelatase-like aaa atpase | Lupro_RS10645 | Not Available | Negative | 2411564 - 2413099 | 56530.3 |
| laci family dna-binding transcriptional regulator | Lupro_RS10650 | Not Available | Negative | 2413345 - 2414379 | 39224.9 |
| penicillin acylase family protein | Lupro_RS10655 | Not Available | Negative | 2414376 - 2416763 | 90122.0 |
| hypothetical protein | Lupro_RS10660 | Not Available | Positive | 2416894 - 2417367 | 18744.2 |
| helix-turn-helix transcriptional regulator | Lupro_RS10665 | Not Available | Positive | 2417360 - 2417560 | 7587.38 |
| dinb family protein | Lupro_RS10670 | Not Available | Negative | 2417557 - 2418072 | 19942.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
