Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | Lupro_RS10430 | Not Available | Positive | 2354542 - 2354841 | 11232.4 |
| polysaccharide deacetylase family protein | Lupro_RS10435 | Not Available | Negative | 2354845 - 2355483 | 24982.1 |
| duf2723 domain-containing protein | Lupro_RS10440 | Not Available | Negative | 2355504 - 2358590 | 119262.0 |
| Trna-gln | Not Available | Not Available | Positive | 2358759 - 2358829 | Not Available |
| universal stress protein | Lupro_RS10450 | Not Available | Negative | 2358885 - 2359715 | 30791.9 |
| ribosome assembly cofactor rimp | Lupro_RS10455 | Not Available | Positive | 2359882 - 2360346 | 17777.5 |
| transcription termination factor nusa | Lupro_RS10460 | Not Available | Positive | 2360359 - 2361618 | 47486.4 |
| translation initiation factor if-2 | Lupro_RS10465 | Not Available | Positive | 2361659 - 2364535 | 106895.0 |
| spor domain-containing protein | Lupro_RS10470 | Not Available | Negative | 2364690 - 2365061 | 14488.6 |
| c-type cytochrome | Lupro_RS10475 | Not Available | Positive | 2365276 - 2366850 | 58713.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
