Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | Lupro_RS10330 | Not Available | Negative | 2325980 - 2326534 | 20936.3 |
| ump kinase | Lupro_RS10335 | Not Available | Negative | 2326559 - 2327266 | 25638.4 |
| vcbs repeat-containing protein | Lupro_RS10340 | Not Available | Negative | 2327346 - 2330636 | 123959.0 |
| beta-n-acetylhexosaminidase | Lupro_RS10345 | Not Available | Negative | 2330710 - 2332764 | 78067.1 |
| glucosamine-6-phosphate deaminase | Lupro_RS10350 | Not Available | Negative | 2332768 - 2334684 | 72349.6 |
| ragb/susd family nutrient uptake outer membrane protein | Lupro_RS10355 | Not Available | Negative | 2334839 - 2336416 | 57963.9 |
| susc/raga family tonb-linked outer membrane protein | Lupro_RS10360 | Not Available | Negative | 2336421 - 2339513 | 112096.0 |
| sensor histidine kinase | Lupro_RS10365 | Not Available | Positive | 2339707 - 2340762 | 41766.6 |
| lytr/algr family response regulator transcription factor | Lupro_RS10370 | Not Available | Positive | 2340752 - 2341474 | 27432.0 |
| sugar mfs transporter | Lupro_RS10375 | Not Available | Positive | 2341627 - 2342958 | 47277.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
