Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | Lupro_RS10280 | Not Available | Positive | 2314147 - 2314893 | 26636.1 |
| hypothetical protein | Lupro_RS10285 | Not Available | Positive | 2314902 - 2315360 | 16326.6 |
| exbd/tolr family protein | Lupro_RS10290 | Not Available | Positive | 2315368 - 2315985 | 23066.5 |
| exbd/tolr family protein | Lupro_RS10295 | Not Available | Positive | 2315995 - 2316462 | 17568.6 |
| porin family protein | Lupro_RS10300 | Not Available | Positive | 2316543 - 2317217 | 26014.7 |
| hypothetical protein | Lupro_RS10305 | Not Available | Negative | 2317205 - 2317810 | 23691.3 |
| rna polymerase factor sigma-54 | Lupro_RS10310 | Not Available | Negative | 2317827 - 2319284 | 56158.1 |
| asparagine--trna ligase | Lupro_RS10315 | Not Available | Negative | 2319368 - 2320801 | 54590.9 |
| efflux rnd transporter permease subunit | Lupro_RS10320 | Not Available | Negative | 2320950 - 2323316 | 89983.8 |
| duf5686 family protein | Lupro_RS10325 | Not Available | Negative | 2323373 - 2325883 | 96465.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
