Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | Lupro_RS00985 | Not Available | Positive | 214017 - 214862 | 30770.5 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | Lupro_RS00990 | Not Available | Positive | 214972 - 216105 | 42540.2 |
| rhs repeat domain-containing protein | Lupro_RS00995 | Not Available | Positive | 216173 - 217696 | 55631.6 |
| hypothetical protein | Lupro_RS01000 | Not Available | Positive | 217703 - 218290 | 22693.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | Lupro_RS01005 | Not Available | Positive | 218546 - 218794 | 9532.4 |
| txe/yoeb family addiction module toxin | Lupro_RS01010 | Not Available | Positive | 218795 - 219055 | 10358.5 |
| hypothetical protein | Lupro_RS13645 | Not Available | Positive | 219127 - 219372 | 9084.95 |
| 3-dehydroquinate synthase | Lupro_RS01020 | Not Available | Negative | 219433 - 220500 | 40067.6 |
| proline dehydrogenase family protein | Lupro_RS01025 | Not Available | Positive | 220585 - 221751 | 45287.7 |
| crp/fnr family transcriptional regulator | Lupro_RS01030 | Not Available | Negative | 221911 - 222597 | 25380.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
