Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3575 domain-containing protein | Lupro_RS09790 | Not Available | Negative | 2209623 - 2210174 | 20762.8 |
| hypothetical protein | Lupro_RS09795 | Not Available | Negative | 2210235 - 2213627 | 130845.0 |
| methylated-dna--[protein]-cysteine s-methyltransferase | Lupro_RS09800 | Not Available | Negative | 2213661 - 2214143 | 18041.7 |
| tatd family hydrolase | Lupro_RS09805 | Not Available | Negative | 2214133 - 2214900 | 29430.4 |
| tetratricopeptide repeat protein | Lupro_RS09810 | Not Available | Negative | 2215259 - 2215999 | 28391.1 |
| rna polymerase sigma factor | Lupro_RS09815 | Not Available | Negative | 2216001 - 2216582 | 22653.2 |
| hypothetical protein | Lupro_RS09820 | Not Available | Positive | 2216702 - 2217736 | 37547.7 |
| pkd domain-containing protein | Lupro_RS09825 | Not Available | Positive | 2217910 - 2219904 | 76259.7 |
| chat domain-containing protein | Lupro_RS09830 | Not Available | Positive | 2219911 - 2222607 | 104008.0 |
| retropepsin-like aspartic protease family protein | Lupro_RS09835 | Not Available | Positive | 2222611 - 2223063 | 16925.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
