Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | Lupro_RS00940 | Not Available | Negative | 199840 - 200160 | 11772.2 |
| s9 family peptidase | Lupro_RS00945 | Not Available | Positive | 200229 - 202307 | 80380.0 |
| plp-dependent cysteine synthase family protein | Lupro_RS00950 | Not Available | Positive | 202379 - 203416 | 38376.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | Lupro_RS00955 | Not Available | Positive | 203568 - 204812 | 46535.5 |
| asparagine synthase b | Lupro_RS13080 | Not Available | Positive | 204888 - 205152 | 9727.9 |
| amidohydrolase family protein | Lupro_RS00960 | Not Available | Negative | 205451 - 206749 | 47820.7 |
| amidohydrolase family protein | Lupro_RS00965 | Not Available | Negative | 206761 - 209730 | 110871.0 |
| duf3810 domain-containing protein | Lupro_RS00970 | Not Available | Negative | 209819 - 210916 | 42792.4 |
| replicative dna helicase | Lupro_RS00975 | Not Available | Positive | 211124 - 212647 | 56249.3 |
| asparagine synthetase b | Lupro_RS00980 | Not Available | Positive | 212657 - 213922 | 48372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
