Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | Lupro_RS09395 | Not Available | Positive | 2122777 - 2123709 | 36012.5 |
| t9ss type a sorting domain-containing protein | Lupro_RS09400 | Not Available | Positive | 2124085 - 2124603 | 19335.5 |
| outer membrane beta-barrel protein | Lupro_RS09405 | Not Available | Positive | 2124672 - 2125310 | 23963.7 |
| hypothetical protein | Lupro_RS09410 | Not Available | Positive | 2125359 - 2127128 | 60834.9 |
| hypothetical protein | Lupro_RS13915 | Not Available | Positive | 2127531 - 2127842 | 11810.3 |
| ompa family protein | Lupro_RS13750 | Not Available | Positive | 2127833 - 2128087 | 9524.26 |
| ompa family protein | Lupro_RS09420 | Not Available | Positive | 2128323 - 2129408 | 40627.0 |
| fe-s cluster assembly protein sufd | Lupro_RS09425 | Not Available | Negative | 2129418 - 2130740 | 49741.4 |
| fe-s cluster assembly atpase sufc | Lupro_RS09430 | Not Available | Negative | 2130748 - 2131485 | 27081.9 |
| fe-s cluster assembly protein sufb | Lupro_RS09435 | Not Available | Negative | 2131570 - 2133018 | 53757.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
