Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | Lupro_RS08915 | Not Available | Positive | 2020482 - 2021816 | 49128.6 |
| enoyl-coa hydratase/isomerase family protein | Lupro_RS08920 | Not Available | Positive | 2021828 - 2022583 | 27941.9 |
| hypothetical protein | Lupro_RS08925 | Not Available | Positive | 2022587 - 2022769 | 6860.56 |
| 6-pyruvoyl trahydropterin synthase family protein | Lupro_RS08930 | Not Available | Positive | 2022786 - 2023238 | 17122.6 |
| aminoacyl-trna hydrolase | Lupro_RS08935 | Not Available | Negative | 2023241 - 2023807 | 21148.6 |
| 50s ribosomal protein l25/general stress protein ctc | Lupro_RS08940 | Not Available | Negative | 2023956 - 2024591 | 23071.4 |
| ribose-phosphate pyrophosphokinase | Lupro_RS08945 | Not Available | Negative | 2024612 - 2025553 | 34833.8 |
| Trna-leu | Not Available | Not Available | Positive | 2025704 - 2025785 | Not Available |
| hypothetical protein | Lupro_RS08955 | Not Available | Negative | 2026145 - 2026843 | 25485.5 |
| thrombospondin type 3 repeat-containing protein | Lupro_RS13870 | Not Available | Negative | 2026846 - 2030394 | 127909.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
