Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | Lupro_RS08815 | Not Available | Positive | 1995880 - 1996899 | 40167.3 |
| duf4292 domain-containing protein | Lupro_RS08820 | Not Available | Positive | 1996900 - 1997676 | 30038.3 |
| murein hydrolase activator envc family protein | Lupro_RS08825 | Not Available | Positive | 1997676 - 1998896 | 47282.9 |
| acyl-coa thioesterase | Lupro_RS08830 | Not Available | Negative | 1998910 - 1999419 | 18616.7 |
| spor domain-containing protein | Lupro_RS08835 | Not Available | Negative | 1999485 - 2000414 | 35163.1 |
| dna-processing protein dpra | Lupro_RS08840 | Not Available | Positive | 2000510 - 2001613 | 41365.6 |
| had family hydrolase | Lupro_RS08845 | Not Available | Positive | 2001958 - 2002554 | 22112.0 |
| hypothetical protein | Lupro_RS08850 | Not Available | Negative | 2002551 - 2002919 | 14173.9 |
| dmt family transporter | Lupro_RS08855 | Not Available | Negative | 2002925 - 2003785 | 32154.6 |
| transcription-repair coupling factor | Lupro_RS08860 | Not Available | Negative | 2003782 - 2007069 | 126075.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
