Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | Lupro_RS00840 | Not Available | Positive | 181351 - 181791 | 17177.9 |
| m15 family metallopeptidase | Lupro_RS00845 | Not Available | Positive | 181784 - 182503 | 28257.1 |
| tetratricopeptide repeat-containing sensor histidine kinase | Lupro_RS00850 | Not Available | Positive | 182622 - 184667 | 77789.8 |
| Trna-met | Not Available | Not Available | Positive | 184931 - 185007 | Not Available |
| start-like domain-containing protein | Lupro_RS00860 | Not Available | Positive | 185135 - 185518 | 15078.5 |
| aminotransferase class iv | Lupro_RS00865 | Not Available | Positive | 185599 - 186417 | 31459.8 |
| yqge/algh family protein | Lupro_RS00870 | Not Available | Negative | 186409 - 186966 | 21308.4 |
| hu family dna-binding protein | Lupro_RS00875 | Not Available | Negative | 187070 - 187342 | 9276.15 |
| methionyl-trna formyltransferase | Lupro_RS00880 | Not Available | Negative | 187531 - 188475 | 35458.6 |
| recq family atp-dependent dna helicase | Lupro_RS00885 | Not Available | Negative | 188475 - 190370 | 72119.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
