Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6909 family protein | Lupro_RS08765 | Not Available | Positive | 1980958 - 1982646 | 63827.1 |
| sugar transferase | Lupro_RS08770 | Not Available | Positive | 1982646 - 1983251 | 23433.5 |
| phosphoribosylamine--glycine ligase | Lupro_RS08775 | Not Available | Positive | 1983266 - 1984537 | 46591.4 |
| glycosyltransferase | Lupro_RS13710 | Not Available | Positive | 1985132 - 1985584 | 17231.3 |
| sensor histidine kinase | Lupro_RS08785 | Not Available | Negative | 1985552 - 1986601 | 40876.1 |
| response regulator transcription factor | Lupro_RS08790 | Not Available | Negative | 1986591 - 1987292 | 26408.4 |
| t9ss type a sorting domain-containing protein | Lupro_RS08795 | Not Available | Positive | 1987550 - 1988341 | 28372.4 |
| 3'-5' exonuclease | Lupro_RS08800 | Not Available | Positive | 1988416 - 1989132 | 27980.6 |
| abc-f family atp-binding cassette domain-containing protein | Lupro_RS08805 | Not Available | Negative | 1989129 - 1990988 | 71832.1 |
| geved domain-containing protein | Lupro_RS13715 | Not Available | Negative | 1991071 - 1995483 | 156653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
