Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | Lupro_RS08715 | Not Available | Positive | 1961616 - 1962941 | 51086.9 |
| hypothetical protein | Lupro_RS13450 | Not Available | Positive | 1963069 - 1963299 | 8817.84 |
| hypothetical protein | Lupro_RS08725 | Not Available | Positive | 1963632 - 1965932 | 85819.8 |
| dna repair protein reco | Lupro_RS08730 | Not Available | Positive | 1965933 - 1966649 | 27468.6 |
| tonb-dependent receptor plug domain-containing protein | Lupro_RS08735 | Not Available | Positive | 1966652 - 1969105 | 92925.9 |
| choice-of-anchor d domain-containing protein | Lupro_RS08740 | Not Available | Positive | 1969241 - 1974970 | 206613.0 |
| m14 family zinc carboxypeptidase | Lupro_RS08745 | Not Available | Positive | 1975002 - 1977515 | 92845.4 |
| acyl-coa dehydrogenase family protein | Lupro_RS08750 | Not Available | Negative | 1977613 - 1978791 | 43304.1 |
| ribonuclease p protein component | Lupro_RS08755 | Not Available | Positive | 1978883 - 1979263 | 15239.9 |
| s41 family peptidase | Lupro_RS08760 | Not Available | Positive | 1979256 - 1980893 | 62416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
