Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | Lupro_RS08615 | Not Available | Positive | 1934620 - 1935264 | 24639.3 |
| duf4175 family protein | Lupro_RS08620 | Not Available | Positive | 1935312 - 1938623 | 129437.0 |
| rrna maturation rnase ybey | Lupro_RS08625 | Not Available | Positive | 1938592 - 1939005 | 16311.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | Lupro_RS08630 | Not Available | Positive | 1939039 - 1940910 | 69525.7 |
| class i sam-dependent methyltransferase | Lupro_RS08635 | Not Available | Positive | 1940965 - 1941825 | 33441.7 |
| omph family outer membrane protein | Lupro_RS08640 | Not Available | Positive | 1942052 - 1942558 | 19246.3 |
| hypothetical protein | Lupro_RS08645 | Not Available | Negative | 1942780 - 1943109 | 13170.0 |
| hded family acid-resistance protein | Lupro_RS08650 | Not Available | Negative | 1943123 - 1943671 | 20858.6 |
| doxx family protein | Lupro_RS08655 | Not Available | Negative | 1943950 - 1944345 | 15034.1 |
| atp-binding protein | Lupro_RS08660 | Not Available | Negative | 1944356 - 1945498 | 43260.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
