Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | Lupro_RS08415 | Not Available | Positive | 1890945 - 1891934 | 36329.6 |
| thioredoxin | Lupro_RS08420 | Not Available | Negative | 1891996 - 1892355 | 13603.5 |
| doxx family membrane protein | Lupro_RS08425 | Not Available | Positive | 1892528 - 1892899 | 13473.7 |
| grea/greb family elongation factor | Lupro_RS08430 | Not Available | Negative | 1893087 - 1893542 | 16971.9 |
| yfcc family protein | Lupro_RS08435 | Not Available | Negative | 1893584 - 1894918 | 48721.9 |
| tigr01212 family radical sam protein | Lupro_RS08440 | Not Available | Positive | 1895023 - 1895961 | 36072.1 |
| pd40 domain-containing protein | Lupro_RS08445 | Not Available | Positive | 1895978 - 1896889 | 34416.3 |
| saccharopine dehydrogenase family protein | Lupro_RS08450 | Not Available | Positive | 1897048 - 1898181 | 42481.2 |
| dna polymerase iv | Lupro_RS08455 | Not Available | Negative | 1898396 - 1899487 | 41150.1 |
| nadp-specific glutamate dehydrogenase | Lupro_RS08460 | Not Available | Negative | 1899661 - 1900998 | 48737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
