Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2tm domain-containing protein | Lupro_RS00795 | Not Available | Positive | 172567 - 172911 | 13655.8 |
| lytr/algr family response regulator transcription factor | Lupro_RS00800 | Not Available | Positive | 172999 - 173751 | 29416.4 |
| asparagine synthase b | Lupro_RS13640 | Not Available | Positive | 173989 - 174300 | 11620.0 |
| 30s ribosomal protein s1 | Lupro_RS00805 | Not Available | Positive | 174415 - 176277 | 69599.8 |
| phosphoglucosamine mutase | Lupro_RS00810 | Not Available | Positive | 176380 - 177762 | 50222.7 |
| hypothetical protein | Lupro_RS00815 | Not Available | Positive | 177779 - 178627 | 32239.2 |
| lysophospholipid acyltransferase family protein | Lupro_RS00820 | Not Available | Negative | 178781 - 179662 | 35295.3 |
| rhomboid family intramembrane serine protease | Lupro_RS00825 | Not Available | Positive | 179763 - 180407 | 23816.5 |
| Trna-gly | Not Available | Not Available | Positive | 180436 - 180511 | Not Available |
| gnat family n-acetyltransferase | Lupro_RS00835 | Not Available | Positive | 180861 - 181364 | 19717.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
