Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Lupro_RS08070 | Not Available | Negative | 1821374 - 1822219 | 31655.2 |
| ompa family protein | Lupro_RS08075 | Not Available | Negative | 1822230 - 1823525 | 49228.2 |
| tetratricopeptide repeat protein | Lupro_RS08080 | Not Available | Negative | 1823921 - 1825600 | 64708.1 |
| duf3109 family protein | Lupro_RS08085 | Not Available | Negative | 1825612 - 1826181 | 21622.1 |
| marc family protein | Lupro_RS08090 | Not Available | Positive | 1826271 - 1826855 | 21073.8 |
| fad-dependent oxidoreductase | Lupro_RS08095 | Not Available | Positive | 1826868 - 1827479 | 21619.5 |
| btpa/sgcq family protein | Lupro_RS08100 | Not Available | Negative | 1827511 - 1828323 | 29930.3 |
| carbohydrate kinase | Lupro_RS08105 | Not Available | Positive | 1828398 - 1829483 | 39641.6 |
| pseudouridine-5'-phosphate glycosidase | Lupro_RS08110 | Not Available | Positive | 1829480 - 1830403 | 33195.5 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | Lupro_RS08115 | Not Available | Negative | 1830404 - 1832254 | 67624.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
