Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | Lupro_RS07925 | Not Available | Negative | 1781259 - 1782179 | 35524.3 |
| tetr/acrr family transcriptional regulator | Lupro_RS07930 | Not Available | Positive | 1782304 - 1782882 | 22391.3 |
| nitroreductase family protein | Lupro_RS07935 | Not Available | Positive | 1782930 - 1783562 | 23879.6 |
| iron-containing alcohol dehydrogenase | Lupro_RS07940 | Not Available | Positive | 1783577 - 1784737 | 42768.6 |
| hypothetical protein | Lupro_RS07945 | Not Available | Positive | 1784981 - 1785184 | 7660.2 |
| hypothetical protein | Lupro_RS13535 | Not Available | Positive | 1785215 - 1785385 | 6685.24 |
| hypothetical protein | Lupro_RS13705 | Not Available | Positive | 1785517 - 1785615 | 3778.63 |
| pyridoxal phosphate-dependent decarboxylase family protein | Lupro_RS07950 | Not Available | Negative | 1785778 - 1787226 | 53802.1 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | Lupro_RS07955 | Not Available | Negative | 1787229 - 1787909 | 25455.9 |
| cupin domain-containing protein | Lupro_RS07960 | Not Available | Negative | 1787911 - 1788270 | 13866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
