Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lutibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lutibacter |
| Species | Lutibacter profundi |
| Strain | LP1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | microaerophile |
| Optimal temperature | 23 |
| Temperature range | Not Available |
| Habitat | biofilm attached to black smoker chimney; Marine |
| Biotic relationship | Free-living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Non-pathogenic |
Gene Summary
Adenine Count
1043213 bp
Thymine Count
1040485 bp
Guanine Count
441498 bp
Cytosine Count
441782 bp
Genome Length
2966978 bp
Protein-coding Genes
2607 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | Lupro_RS07830 | Not Available | Negative | 1757915 - 1759126 | 46643.5 |
| endonuclease/exonuclease/phosphatase family protein | Lupro_RS07835 | Not Available | Positive | 1759268 - 1760239 | 37870.1 |
| s9 family peptidase | Lupro_RS07840 | Not Available | Positive | 1760379 - 1762283 | 71943.3 |
| duf5689 domain-containing protein | Lupro_RS07845 | Not Available | Negative | 1762342 - 1764408 | 76397.3 |
| tonb-dependent receptor | Lupro_RS07850 | Not Available | Negative | 1764419 - 1767178 | 104526.0 |
| endonuclease | Lupro_RS13530 | Not Available | Positive | 1767309 - 1768352 | 40247.4 |
| single-stranded-dna-specific exonuclease recj | Lupro_RS07860 | Not Available | Negative | 1768357 - 1770054 | 63566.4 |
| osmc family protein | Lupro_RS07865 | Not Available | Negative | 1770090 - 1770509 | 15762.2 |
| class i sam-dependent dna methyltransferase | Lupro_RS07870 | Not Available | Positive | 1770722 - 1771345 | 24024.7 |
| hypothetical protein | Lupro_RS07875 | Not Available | Positive | 1771438 - 1771902 | 17594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
